Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922321.1_cds_XP_016471127.1_63504
CDS Infomation

[gene=LOC107793308] [db_xref=GeneID:107793308] [protein=pectinesterase 2-like] [protein_id=XP_016471127.1] [location=complement(join(22857..23545,24333..25221))] [gbkey=CDS]
Sequence

ATGACATACATAACAATGTCCAATATCTATTTGATTTTTCCACTTTTATTTGTGTCTTCT
TTCTTTTTCCCATCCACCAATGGCTACTCTATGGCAGCCATAAAATCTTGGTGTATCCAA
ACACCTCACCCACAACCTTGTGAATACTTCTTGACACAAAATCCTAAATATTCAACTCCT
ATCAACAAAAAATCAGATTTTCTCAAAGTGTCACTAGAATTAGCCCTAGACCGTGCCTTA
CGTGCCCAAACGAACGCATATTCACTAGGTTCAAAATGTCGTAACGAGCGCGAAAAGGCT
GCATGGGCTGATTGTCTTGAACTATATGAACATACTATCCACAAGATCAAAAGCACAGTT
GATCCAAATACTAAATGCACAGCTGCTGATGCTCAATCATGGTTAAGTACAGCCTTAACC
AACCTCGAAACATGCAGAGCTGGTTTCGAAGAACTTGGGGTCACGGATTATGTGATGCCA
TTAATGTCAAATAATGTTTCATCTTTAATTAGTAACACTTTGTCTTTGAACCATGGTTAC
TATACTGAGCCAACTGCAACTCAAGTAGATGGTTTCCCAACTTGGGTTGCACCTGGTGAT
CGAAAACTATTGCAATCATCTTCTCCAGCTTCTCAGGCGAATATTGTGGTGGCAAAAGAT
GGTTCAGGGAATTTCAAGACTGTGAAAGAAGCTGTTGCTGCTGCTGGCAAGAGGAAAGGA
AGTGCTAGGTTTGTGATATATGTGAAGGCAGGAATTTACAGTGAAAATGTGGAGTTAGGA
TCAAAGTTGAAGAATATAATGTTTGTTGGAGATGGAATTGGAAAAACAATTATCACAGGA
AGCAAGAGTGTTGGAGGAGGATCCACCACTTTCAAATCAGCCACTGTTGCCGTTGTCGGT
GATGGATTTATTTGTCGAGGCATAACAATTAGGAACACTGCTGGCCCCCAAAACCACCAA
GCAGTAGCCCTCCGATCTGGCTCAGACCTTTCTGTATTCTATCAATGTAGTTTTGAGGGA
TATCAAGACACTCTTTATGTCCACTCTGATAGACAATTTTATAGAGAATGTGATGTGTAT
GGTACAGTTGACTTCATATTCGGAAACGCAGCAGTTGTGTTACAAAATTGTAACATTTTT
GCTAGAGATCCTCCAAACAAGACCAACACTGTGACAGCACAGGGAAGAACTGATCCAAAC
CAAAACACTGGAATTTCAATTCATAATTGTAGAATCACAGCTGCTTCGGATTTAAAGGCT
TCTAAAAACTCAGTTAAGACATATTTAGGAAGGCCATGGAAACAATATTCACGTACTGTT
GTCATGAAAACGTTCCTCGATAGCTTGATTCAACCAGATGGTTGGATGCCTTGGAGTGGT
ACCTTCGCGCTGAAAACGTTGTACTATGGAGAATACTTGAACACTGGTCCTGGTTCTTCA
ACTGCAAATAGGGTTAAATGGGGTGGTTATCGTGTTATTACTAGTGCTGCTGAGGCATCC
AAATTCACACCTGCTAATTTCATTGCTGGAAATTCTTGGTTGCCAGCCACCAACGTGCCA
TTCACTTCTGGTCTTTGA

Peptide Sequence

PEP ID

XP_016471127.1
PEP Infomation

PREDICTED: pectinesterase 2-like [Nicotiana tabacum]
Sequence

MTYITMSNIYLIFPLLFVSSFFFPSTNGYSMAAIKSWCIQTPHPQPCEYFLTQNPKYSTP
INKKSDFLKVSLELALDRALRAQTNAYSLGSKCRNEREKAAWADCLELYEHTIHKIKSTV
DPNTKCTAADAQSWLSTALTNLETCRAGFEELGVTDYVMPLMSNNVSSLISNTLSLNHGY
YTEPTATQVDGFPTWVAPGDRKLLQSSSPASQANIVVAKDGSGNFKTVKEAVAAAGKRKG
SARFVIYVKAGIYSENVELGSKLKNIMFVGDGIGKTIITGSKSVGGGSTTFKSATVAVVG
DGFICRGITIRNTAGPQNHQAVALRSGSDLSVFYQCSFEGYQDTLYVHSDRQFYRECDVY
GTVDFIFGNAAVVLQNCNIFARDPPNKTNTVTAQGRTDPNQNTGISIHNCRITAASDLKA
SKNSVKTYLGRPWKQYSRTVVMKTFLDSLIQPDGWMPWSGTFALKTLYYGEYLNTGPGSS
TANRVKWGGYRVITSAAEASKFTPANFIAGNSWLPATNVPFTSGL

Transcript Sequence

Gene sequence data has not been registered.